BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C08LP1|AL429875
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1274 1688 0.0
>3x_Contig1274
Length = 5941
Score = 1688 bits (846), Expect = 0.0
Identities = 886/900 (98%), Gaps = 4/900 (0%)
Strand = Plus / Minus
Query: 1 gatcttcaagtcacctttagtaccgtgtatatctattaccaggttcttggtcaatttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2948 gatcttcaagtcacctttagtaccgtgtatatctattaccaggttcttggtcaatttctt 2889
Query: 61 cactggagttccacctttaaagcgkgcaagatacgggtaccttcccattttccaatattc 120
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2888 cactggagtaccacctttaaagc-tgcaagatacgggtaccttcccattttccaatattc 2830
Query: 121 cctggrataaaagatggkctgggsacgtctttgaaattgtttccttggtccgtttcccat 180
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2829 cctggaataaaagatggtctgggcacgtctttgaaattgtttccttggtccgtttcccat 2770
Query: 181 tctcatccaataggaactggagttgggatattgtttgagatcatcgcattgatcttttgg 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2769 tctcatccaataggaactg-agttgggatattgtttgagatcatcgcattgatcttttgg 2711
Query: 241 raawacgaccctgtgatgtactgtaatacatcgatcgctgtgtccgaacgaagttcgata 300
|| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 2710 aaatacgaccctgtgatgtactgtaatacatcgatcg-tgtgtccgaacgaa-ttcgata 2653
Query: 301 tcaaattcacaccgctctcgatgtcgtacaaatactccggcgatctcattggacgttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 tcaaattcacaccgctctcgatgtcgtacaaatactccggcgatctcattggacgttcat 2593
Query: 361 acccataccaaccaccgttgcccgatatctcgatggaattgatgtctccgatacaacctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2592 acccataccaaccaccgttgcccgatatctcgatggaattgatgtctccgatacaacctt 2533
Query: 421 cgctgattaactctttggcccgaacgatgtatggcgatttacgtccttggagacatatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 cgctgattaactctttggcccgaacgatgtatggcgatttacgtccttggagacatatga 2473
Query: 481 tcgtttgtwaattggcacgctgctgagatatcgaatacaactcttctgcctgttgtacgc 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 tcgtttgtaaattggcacgctgctgagatatcgaatacaactcttctgcctgttgtacgc 2413
Query: 541 ttgcagcaagagcccattccacgtacaaataccttagattcaggttctgggacgaatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 ttgcagcaagagcccattccacgtacaaataccttagattcaggttctgggacgaatgtt 2353
Query: 601 ccaatatattcttgaccacctcgtaatgctctggcacttttacactaacaamgatcatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2352 ccaatatattcttgaccacctcgtaatgctctggcacttttacactaacaacgatcatat 2293
Query: 661 cgatatctttatactgagcaaaagattccaacgaatcaaaccctgtagcatgtttcaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 cgatatctttatactgagcaaaagattccaacgaatcaaaccctgtagcatgtttcaatt 2233
Query: 721 gcaactgttcaatggtctgaagactcgatttcaaagtagggttgtacaaggccactatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 gcaactgttcaatggtctgaagactcgatttcaaagtagggttgtacaaggccactatct 2173
Query: 781 ggaactgtgaactgagctgctgtatggctaagaaatgcgtsttggcaacccaacttttac 840
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2172 ggaactgtgaactgagctgctgtatggctaagaaatgcgtcttggcaacccaacttttac 2113
Query: 841 cactggttaacccaacgaaaccaacacggatcggtctactcgatggcaccgtggataatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 cactggttaacccaacgaaaccaacacggatcggtctactcgatggcaccgtggataatt 2053
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5230
Number of Sequences: 1807
Number of extensions: 5230
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)